{ "_id": "6a27d1ac24555f66ed54521c", "Package": "hclust1d", "Title": "Hierarchical Clustering of Univariate (1d) Data", "Version": "0.1.1.9000", "Authors@R": "person(\"Szymon\", \"Nowakowski\", email = \"s.nowakowski@mimuw.edu.pl\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-1939-9512\"))", "Description": "Univariate agglomerative hierarchical clustering with a\ncomprehensive list of choices of a linkage function in O(n*log\nn) time. The better algorithmic time complexity is paired with\nan efficient 'C++' implementation.", "License": "GPL (>= 3)", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "URL": "https://github.com/SzymonNowakowski/hclust1d", "BugReports": "https://github.com/SzymonNowakowski/hclust1d/issues", "RoxygenNote": "7.2.3", "Config/testthat/edition": "3", "VignetteBuilder": "knitr", "Repository": "https://szymonnowakowski.r-universe.dev", "Date/Publication": "2023-08-07 15:33:02 UTC", "RemoteUrl": "https://github.com/szymonnowakowski/hclust1d", "RemoteRef": "HEAD", "RemoteSha": "809df7559f2e37c34b61b4d21e15afcea5491ff6", "NeedsCompilation": "yes", "Packaged": { "Date": "2026-06-09 08:33:55 UTC", "User": "root" }, "Author": "Szymon Nowakowski [aut, cre] (ORCID:\n)", "Maintainer": "Szymon Nowakowski ", "MD5sum": "32c0f801ca62891a9a0a65dfaec9919c", "_user": "szymonnowakowski", "_type": "src", "_file": "hclust1d_0.1.1.9000.tar.gz", "_fileid": "9039d54fe4cbbc397af549c3b560c6d8c28c46ffaf4aa477e03ae5dca552d2ab", "_filesize": 707510, "_sha256": "9039d54fe4cbbc397af549c3b560c6d8c28c46ffaf4aa477e03ae5dca552d2ab", "_created": "2026-06-09T08:33:55.000Z", "_published": "2026-06-09T08:41:16.127Z", "_distro": "noble", "_jobs": [ { "job": 80281170432, "time": 162, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "7502590899" }, { "job": 80281170430, "time": 170, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7502592294" }, { "job": 80281170419, "time": 169, "config": "linux-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7502592811" }, { "job": 80281170452, "time": 177, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7502594926" }, { "job": 80281170490, "time": 210, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7502594111" }, { "job": 80281170540, "time": 401, "config": "macos-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "7502665399" }, { "job": 80281170447, "time": 174, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7502585532" }, { "job": 80281170485, "time": 358, "config": "macos-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7502649294" }, { "job": 80280632234, "time": 187, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7502528690" }, { "job": 80281170461, "time": 131, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7502579027" }, { "job": 80281170501, "time": 192, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7502599606" }, { "job": 80281170541, "time": 200, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7502602664" }, { "job": 80281170408, "time": 219, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7502609456" } ], "_buildurl": "https://github.com/r-universe/szymonnowakowski/actions/runs/27193898024", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/szymonnowakowski/hclust1d", "_commit": { "id": "809df7559f2e37c34b61b4d21e15afcea5491ff6", "author": "SzymonNowakowski ", "committer": "SzymonNowakowski ", "message": "starting a new development version\n", "time": 1691422382 }, "_maintainer": { "name": "Szymon Nowakowski", "email": "s.nowakowski@mimuw.edu.pl", "orcid": "0000-0002-1939-9512" }, "_registered": true, "_dependencies": [ { "package": "Rcpp", "role": "LinkingTo" }, { "package": "Rcpp", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "szymonnowakowski", "_selfowned": true, "_usedby": 1, "_updates": [], "_tags": [], "_stars": 3, "_contributors": [ { "user": "szymonnowakowski", "count": 102, "uuid": 73636503 } ], "_userbio": { "uuid": 73636503, "type": "user", "name": "SzymonNowakowski" }, "_downloads": { "count": 244, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/hclust1d" }, "_devurl": "https://github.com/szymonnowakowski/hclust1d", "_searchresults": 10, "_topics": [ "cpp" ], "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/hclust1d.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_homeurl": "https://github.com/szymonnowakowski/hclust1d", "_realowner": "szymonnowakowski", "_cranurl": true, "_releases": [ { "version": "0.0.1", "date": "2023-04-11" }, { "version": "0.1.0", "date": "2023-07-10" }, { "version": "0.1.1", "date": "2023-08-07" } ], "_exports": [ "hclust1d", "supported_dist.methods", "supported_methods" ], "_help": [ { "page": "hclust1d-package", "title": "hclust1d-package", "topics": [ "hclust1d-package" ] }, { "page": "hclust1d", "title": "Hierarchical Clustering for 1D", "topics": [ "hclust1d" ] }, { "page": "supported_dist.methods", "title": "Supported Distance Methods", "topics": [ "supported_dist.methods" ] }, { "page": "supported_methods", "title": "Supported Linkage Methods", "topics": [ "supported_methods" ] } ], "_readme": "https://github.com/szymonnowakowski/hclust1d/raw/HEAD/README.md", "_rundeps": [ "Rcpp" ], "_sysdeps": [ { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "14.2.0-4ubuntu2~24.04.1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" } ], "_vignettes": [ { "source": "replacing-hclust.Rmd", "filename": "replacing-hclust.html", "title": "A guide on replacing stats::hclust with hclust1d", "engine": "knitr::rmarkdown", "headings": [ "This document", "Why bother?", "Introduction", "Compatibility of hclust1d with stats::hclust", "Choosing a linkage function in hclust1d", "Choosing a distance metric in hclust1d", "Exceptions", "Replacing stats::hclust in case of ward.D, centroid or median linkage functions", "Optional changes to the surrounding code", "Replacing stats::hclust in case of all other linkage functions, besides ward.D, centroid or median" ], "created": "2023-07-08 21:20:34", "modified": "2023-08-07 09:29:13", "commits": 5 }, { "source": "getting-started.Rmd", "filename": "getting-started.html", "title": "Getting started with hclust1d", "author": "Szymon Nowakowski", "engine": "knitr::rmarkdown", "headings": [ "This document", "Clustering in 1D", "Hierarchical clustering in a nutshell", "Linkage function concept", "Merging height", "Linkage functions list", "Computational complexity of 1D hierarchical clustering", "OK, so let's get started", "How to change the linkage function used for clustering", "Should I provide points or rather a distance matrix to hclust1d?", "Examples", "What about squared distances?", "A note on ward.D2 and ward.D", "Cutting heights", "References" ], "created": "2023-07-07 09:51:16", "modified": "2023-08-02 14:34:07", "commits": 10 } ], "_score": 4.954242509439325, "_indexed": true, "_nocasepkg": "hclust1d", "_universes": [ "szymonnowakowski" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.1.9000", "date": "2026-06-09T08:36:01.000Z", "distro": "noble", "arch": "aarch64", "commit": "809df7559f2e37c34b61b4d21e15afcea5491ff6", "fileid": "5edb53d159e666c15056363e82d8d5e07b3a4f681460f1d72a0f08fee1f676cb", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/szymonnowakowski/actions/runs/27193898024" }, { "r": "4.7.0", "os": "linux", "version": "0.1.1.9000", "date": "2026-06-09T08:36:01.000Z", "distro": "noble", "arch": "x86_64", "commit": "809df7559f2e37c34b61b4d21e15afcea5491ff6", "fileid": "72a5614dc8c4fec884927928e8d8430fb2b0587a16c6ec0cdc76499f6cf485c5", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/szymonnowakowski/actions/runs/27193898024" }, { "r": "4.6.0", "os": "linux", "version": "0.1.1.9000", "date": "2026-06-09T08:36:05.000Z", "distro": "noble", "arch": "aarch64", "commit": "809df7559f2e37c34b61b4d21e15afcea5491ff6", "fileid": "6b9560dd2ecc290657c742e70b305492980161f7ae732d46f4d9bbc25e1f53bd", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/szymonnowakowski/actions/runs/27193898024" }, { "r": "4.6.0", "os": "linux", "version": "0.1.1.9000", "date": "2026-06-09T08:36:09.000Z", "distro": "noble", "arch": "x86_64", "commit": "809df7559f2e37c34b61b4d21e15afcea5491ff6", "fileid": "675a6a17929db276392786ef125af07af8f0c9cd62e87f3bad1f9eb9419197b5", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/szymonnowakowski/actions/runs/27193898024" }, { "r": "4.5.3", "os": "mac", "version": "0.1.1.9000", "date": "2026-06-09T08:36:14.000Z", "arch": "aarch64", "commit": "809df7559f2e37c34b61b4d21e15afcea5491ff6", "fileid": "c204dd53ca663fd5a62504ae914558c84418d82e1b544daf03f2e5379f575761", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/szymonnowakowski/actions/runs/27193898024" }, { "r": "4.5.3", "os": "mac", "version": "0.1.1.9000", "date": "2026-06-09T08:38:49.000Z", "arch": "x86_64", "commit": "809df7559f2e37c34b61b4d21e15afcea5491ff6", "fileid": "a7c866c632e7e14cae749dc31309a4bd8187bf9d75ed35eea28abd1ca301afed", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/szymonnowakowski/actions/runs/27193898024" }, { "r": "4.6.0", "os": "mac", "version": "0.1.1.9000", "date": "2026-06-09T08:35:57.000Z", "arch": "aarch64", "commit": "809df7559f2e37c34b61b4d21e15afcea5491ff6", "fileid": "64c4422de44904afdfec0699552036c01d69b4679d2c9902ba04a6ae194880af", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/szymonnowakowski/actions/runs/27193898024" }, { "r": "4.6.0", "os": "mac", "version": "0.1.1.9000", "date": "2026-06-09T08:37:05.000Z", "arch": "x86_64", "commit": "809df7559f2e37c34b61b4d21e15afcea5491ff6", "fileid": "04feb0f798dc4db8d4fcf54741f0b4c24f609eeb876887a7131e106cc6889bee", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/szymonnowakowski/actions/runs/27193898024" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.1.9000", "date": "2026-06-09T08:36:17.000Z", "arch": "emscripten", "commit": "809df7559f2e37c34b61b4d21e15afcea5491ff6", "fileid": "58040df6d7713f61df49d81588421188618de741e4c340734bdf833fc82ca1d7", "status": "success", "buildurl": "https://github.com/r-universe/szymonnowakowski/actions/runs/27193898024" }, { "r": "4.7.0", "os": "win", "version": "0.1.1.9000", "date": "2026-06-09T08:35:18.000Z", "arch": "x86_64", "commit": "809df7559f2e37c34b61b4d21e15afcea5491ff6", "fileid": "e713a87b4d898e30be58800c820611a0ff7ae6afabc201d21c61082009858af4", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/szymonnowakowski/actions/runs/27193898024" }, { "r": "4.5.3", "os": "win", "version": "0.1.1.9000", "date": "2026-06-09T08:35:11.000Z", "arch": "x86_64", "commit": "809df7559f2e37c34b61b4d21e15afcea5491ff6", "fileid": "3dfd398b823f769106daf5c400567745a6b2be978eba054636e1e7059dcd642c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/szymonnowakowski/actions/runs/27193898024" }, { "r": "4.6.0", "os": "win", "version": "0.1.1.9000", "date": "2026-06-09T08:35:29.000Z", "arch": "x86_64", "commit": "809df7559f2e37c34b61b4d21e15afcea5491ff6", "fileid": "a034c2e6df5cc3fc1b2d4461d4459f55838742b80d5dd9cb48ba8c312b3cc65c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/szymonnowakowski/actions/runs/27193898024" } ] }